Data Download
GTEx Cohort
H&E Whole Slide Images
| Item | Samples | Format | Link |
|---|---|---|---|
| H&E whole slide images | 399 | SVS | GTEx Portal |
Exported ROI Images
| Item | Samples | Format | Link |
|---|---|---|---|
| Exported ROI images | 399 | TIFF / JPEG + GeoJSON | Baidu Pan (Code: 4h58) |
| Exported ROI images | 399 | TIFF / JPEG + GeoJSON | OneDrive |
Source: Genotype-Tissue Expression (GTEx) Project — autopsy skeletal muscle from donors across a subclinical wasting spectrum.
HuashanMuscle Cohort
H&E Whole Slide Images
| Item | Samples | Format | Status |
|---|---|---|---|
| H&E whole slide images | 79 | VSI | Coming soon |
Exported ROI Images
| Item | Samples | Format | Link |
|---|---|---|---|
| Exported ROI images | 79 | TIFF / JPEG + GeoJSON | Baidu Pan (Code: pcqj) |
| Exported ROI images | 79 | TIFF / JPEG + GeoJSON | OneDrive |
Source: Huashan Hospital, Fudan University — clinical muscle biopsies including DM1, LGMD, and pathologically normal controls.
Citation
If you use these datasets, please cite:
Zhong H*, Gao M*, et al. MyoPath: A Deep Learning Pipeline for Objective Morphometric Assessment of Skeletal Muscle Biopsies. Manuscript in preparation.